dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01758
Location and strand information: 38466 - 39695 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9122
Protein molecular weight: 46854.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01759
Location and strand information: 39879 - 42038 (-)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 9.2841
Protein molecular weight: 82926.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01760
Location and strand information: 42286 - 43413 (+)
Family: PL0|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7299
Protein molecular weight: 43317.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01761
Location and strand information: 43503 - 44942 (-)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1986
Protein molecular weight: 55824.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01762
Location and strand information: 44960 - 47338 (-)
Family: GH95|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0037
Protein molecular weight: 90608.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01763
Location and strand information: 47622 - 51632 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01764
Location and strand information: 51858 - 52301 (+)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01765
Location and strand information: 52458 - 55589 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01766
Location and strand information: 55605 - 57464 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01767
Location and strand information: 57483 - 60269 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01768
Location and strand information: 60281 - 61963 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01769
Location and strand information: 62056 - 62958 (+)
Family: null
Protein type: null
Protein description: Keratan-sulfate endo-1,4-beta-galactosidase

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01770
Location and strand information: 62987 - 64213 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.5036
Protein molecular weight: 47106.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01771
Location and strand information: 64225 - 67626 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.5596
Protein molecular weight: 130188.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_144|CGC1
Gene ID: MGYG000003252_01772
Location and strand information: 67639 - 69570 (+)
Family: PL0|PL33_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4549
Protein molecular weight: 73399.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003252_01758
MGYG000003252_01759	PL8_e29
MGYG000003252_01760	PL0_e6\|GH105_e41
MGYG000003252_01761	GH29_e46
MGYG000003252_01762	GH95_e12\|CBM51_e13\|3.2.1.63	xyloglucan\|hostglycan
MGYG000003252_01770	GH88_e23\|3.2.1.-	hostglycan
MGYG000003252_01771	GH2_e4\|3.2.1.23	beta-galactan
MGYG000003252_01772	PL0_e60

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_01758	hypothetical protein	CAZyme	38466	39695	-	GH154
MGYG000003252_01759	Chondroitinase-AC	CAZyme	39879	42038	-	PL8_3\| PL8
MGYG000003252_01760	hypothetical protein	CAZyme	42286	43413	+	PL0\| GH105
MGYG000003252_01761	hypothetical protein	CAZyme	43503	44942	-	GH29
MGYG000003252_01762	hypothetical protein	CAZyme	44960	47338	-	GH95\| CBM51
MGYG000003252_01763	Sensor histidine kinase RcsC	TF	47622	51632	+	HTH_AraC
MGYG000003252_01764	hypothetical protein	STP	51858	52301	+	AraC_binding
MGYG000003252_01765	hypothetical protein	TC	52458	55589	+	1.B.14.6.1
MGYG000003252_01766	hypothetical protein	null	55605	57464	+	SusD-like_3\| SusD_RagB
MGYG000003252_01767	TonB-dependent receptor SusC	TC	57483	60269	+	1.B.14.6.1
MGYG000003252_01768	hypothetical protein	null	60281	61963	+	SusD-like_3\| SusD_RagB
MGYG000003252_01769	Keratan-sulfate endo-1,4-beta-galactosidase	null	62056	62958	+	Glyco_hydro_16
MGYG000003252_01770	Unsaturated chondroitin disaccharide hydrolase	CAZyme	62987	64213	+	GH88
MGYG000003252_01771	Evolved beta-galactosidase subunit alpha	CAZyme	64225	67626	+	GH2
MGYG000003252_01772	hypothetical protein	CAZyme	67639	69570	+	PL0\| PL33_1
Protein ID	Protein Name	Type	Start	End	Strand	Signature